GeneWalk modules referenceΒΆ
- Process gene lists and map between ID types (
genewalk.gene_lists) - Networkx MultiGraph assembler (
genewalk.nx_mg_assembler) - Run DeepWalk on a GeneWalk graph (
genewalk.deepwalk) - Calculate null distributions (
genewalk.null_distributions) - Get relevant INDRA Statements (
genewalk.get_indra_stmts) - Perform statistics and output results (
genewalk.perform_statistics) - Plotting results (
genewalk.plot) - Manage resource files (
genewalk.resources)